FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004686557

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004686557
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences302696
Sequences flagged as poor quality0
Sequence length20-76
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATATACGGCCGTGTCGTCGGCTCTCAGGCTGTTCATTTGCAGAAACA11800.38983006052276875No Hit
GTATTACTGTCAGCAATATGTTTACTCACCTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAACGAA7160.2365409519782224No Hit
CTTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGT5980.1975579459259455No Hit
GTATATTACTGTGCGAAACATCACACGATGACTTCGGGCCACTGGTACTT5550.18335227422892936No Hit
GGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTT5370.17740571398366678No Hit
GTCATAGGTGGTCAGGTCTGTGACCAGGCAGGTCAACTTGGTGGACTTGG5110.16881623807384305No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT4690.15494093083489704No Hit
CTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGG4110.13577979226682876No Hit
CAGTAATACACTGCAAAATCTTCAGGCTCCAGTCGGCTGATGGTGAGAGTGAAGTCTGTCCCAGACCCACTGCCA3920.12950286756349605No Hit
GTGCAGGGCCACCCCCTTGGGCCGGGAGATGGTCTGCTTCAGTGGCGAGGGCAGGTCTGTGTGGGTCACGGTGCA3860.1275206808150752No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG3480.11496683140840977No Hit
GTATGTGAGACCACCAGTAGCACTAAGAGTTGACACCCACTCCAGCCCCTTCCCTGGAGCCTGGCGGACCCAGGT3300.10902027116314718No Hit
GTGTATTACTGTCAGCAATATGTTTACTCACCTCCGCTCACTTTCGGCGG3270.10802917778893677No Hit
GTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATAGTA3250.10736844887279647No Hit
CAGTAATATACGGCCGTGTCGTCGGCTCTCAGGCTGTTCATTTGCAGAAA3190.10538626212437562No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC3170.10472553320823533No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)