EGAF00004686907 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004686907
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	887218
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTTTATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGT	2298	0.25901187757687516	No Hit
GCTCAGTAGCAGGTGCCGTCCACCTCCGCCATGACAACAGACACATTGAC	2178	0.2454864531603281	No Hit
ATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGTCCACCT	1701	0.1917228911045538	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1475	0.16625000845339025	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	1449	0.16331949982980506	No Hit
GTAGCAGGTGCCGTCCACCTCCGCCATGACAACAGACACATTGACATGGG	1412	0.15914916063470308	No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA	1319	0.14866695671187916	No Hit
CAGTAGCAGGTGCCGTCCACCTCCGCCATGACAACAGACACATTGACATG	1299	0.1464127193091213	No Hit
GTACCTGACTTGGGCATCCCGGCAGGAGCCCAGCCAGGGCACCACCACCT	1294	0.14584915995843184	No Hit
CATTGACATGGGTGGGTTTACCCGCCAAGCGGTCGATGGTCTTCTGTGTGAAGGCCAGCGGCAGGGCCTCGTGGC	1256	0.14156610889319196	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	1158	0.1305203456196786	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1136	0.12804068447664496	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG	1095	0.1234194978009914	No Hit
ATGGTCTTCTGTGTGAAGGCCAGCGGCAGGGCCTCGTGGCCCACCATGCA	1071	0.120714412917682	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	1017	0.11462797193023586	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	1014	0.11428983631982217	No Hit
CCAGCATACTGCGCGTGGCAGCCGAGGACTGGAAGAAGGGGGACACCTTCTCCTGCATGGTGGGCCACGAGGCC	998	0.1124864463976159	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGTAT	25	2.616097E-4	54.98791	39
GGTATCA	1680	0.0	42.465042	1
ACTCGAC	230	0.0	39.267574	27
TCGTATG	160	0.0	38.794106	40
CGTATGC	170	0.0	38.646435	41
CGACGTC	220	0.0	38.190784	30
TCGACGT	220	0.0	38.121475	29
GGCTAGC	35	0.0015949995	38.09948	1
GTATCAA	4015	0.0	36.11859	1
GACGTCA	240	0.0	35.083965	31
CTCGACG	240	0.0	34.891262	28
GACTCGA	260	0.0	34.699413	26
CCCACGA	270	0.0	34.587345	19
ATGTCGT	40	0.002735571	34.13344	37
AGACTCG	265	0.0	34.02549	25
TATACAC	340	0.0	33.337044	3
GTATGCC	220	0.0	33.101456	42
ACGTCAT	215	0.0	32.951744	32
ACGAGAC	275	0.0	32.747524	22
GACCGGA	160	1.1852353E-7	32.533962	70