EGAF00004687181 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004687181
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	634754
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGT	3653	0.5754985395917158	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	889	0.1400542572398126	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAGCGGCTGCAC	829	0.1306017764362257	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	766	0.12067667159245943	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	757	0.1192587994719214	No Hit
GTATGTAGACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC	732	0.11532026580376019	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	655	0.10318958210582367	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	740	0.0	47.135235	41
CTCGTAT	645	0.0	46.922493	39
ATATCGT	65	2.564775E-10	46.892113	37
TCGTATG	755	0.0	46.373615	40
TATACAC	745	0.0	46.32182	3
GCCGTCT	755	0.0	45.792164	46
ATCTCGT	645	0.0	45.680428	37
ATGCCGT	775	0.0	45.487514	44
TGCCGTC	765	0.0	45.394283	45
AAAGGGG	580	0.0	44.869858	68
CCGTCTT	785	0.0	44.743267	47
GTATGCC	780	0.0	44.554405	42
TTATACA	755	0.0	44.43861	2
GGCAATC	670	0.0	43.614647	33
AGGCAAT	785	0.0	43.33628	32
GCTACGC	30	9.1436476E-4	42.661777	20
TGCTTGA	895	0.0	42.58699	55
CGAGACA	790	0.0	42.57379	23
CTTGAAA	910	0.0	42.55283	57
AATCTCG	700	0.0	41.870987	36