FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004687446

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004687446
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1825
Sequences flagged as poor quality0
Sequence length21-76
%GC86

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG112461.58904109589041No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG361.9726027397260273No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG30.16438356164383564No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.16438356164383564No Hit
GGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.16438356164383564No Hit
GGAGGATTTGCTAGCGCTACCAGTGG20.1095890410958904No Hit
GTGCTGCTGAGGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCTGTGACACT20.1095890410958904No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGG20.1095890410958904No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG20.1095890410958904No Hit
TTGGAGGATTTGCTAGCGCTACCAGTG20.1095890410958904No Hit
CTGGTAGCGCTAGCAAATCCTCCAATG20.1095890410958904No Hit
GCTGATACCAATGTAAATAACTTCCAATGGTCTGACTTGTCCGGCAAGTGATGGTGACTCTGTCTCCAACAGATG20.1095890410958904No Hit
GGATATCCCACTGCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGACACACCTG20.1095890410958904No Hit
GTCTGGGACAGACTTCACTCTCATCATCAGCAGACTGGAGCCTGAAGATT20.1095890410958904No Hit
ATTACAGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACGAGAT20.1095890410958904No Hit
GCTCCTGGGGCTCCTGCTACTCTGGCTCCGAGGTGCCAGATGTGACATCCAGATGATCCAGTCCCCATCCTCC20.1095890410958904No Hit
CTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAAC20.1095890410958904No Hit
CTGGTAGCGCTAGCAAATCCTCCAATGA20.1095890410958904No Hit
TCTGGCAGCTCTGCGTTTCGGTGGCGATGGTGATGAGCTGAAACGTGGTGGTAAAC20.1095890410958904No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGG20.1095890410958904No Hit
GGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1095890410958904No Hit
GGCTCAGCTCGCATGTGGAAGACTCTCACCTTCTTCGTCGCGCTCCCCGG20.1095890410958904No Hit
ATTGGAGGATTTGCTAGCGCTACCAGTG20.1095890410958904No Hit
ATTCTGGGTTGGTGTTTTACTTATTTCTTTCAACACTTTAAATATTTGAA20.1095890410958904No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1095890410958904No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC20.1095890410958904No Hit
CTTATACACATCTGACGCTGCCGACGATACTCCTTGTGTAGATCTCGGTG20.1095890410958904No Hit
GGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1095890410958904No Hit
GTGGATTCAGGTTTCGCTGGTCTTCCAGACTTTACAGCAGATGCGTGATA20.1095890410958904No Hit
TAGATGAGGTGAAAAGAGTTTTGGAAGACCGTCCAGTTTCACCGTTATGG20.1095890410958904No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGG20.1095890410958904No Hit
GGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1095890410958904No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)