FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004687579

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004687579
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87
Sequences flagged as poor quality0
Sequence length42-76
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAACCCTATGACGACATAAGCCACAAAAAAATATGGCGTCCCCTTTCCACAGGCCGTTACGAAGACCCGAAA11.1494252873563218No Hit
GGCCCTGATGGGTGACTTCGCAGGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTG11.1494252873563218No Hit
GAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCT11.1494252873563218No Hit
TCCTCAGCCTCCACCCTGCTGATTATCAGTGTGAAATCAGTGCCTGACCCACTGCCGCTGAATCTGTCTGGGACC11.1494252873563218No Hit
GAATAAACGAAAAGAAAGAAACAACTGAGACATCAGACAAATCAATTCTATTACACTATATATAAAAAAAAACA11.1494252873563218No Hit
GTCACCATCTCTTGCTCTGGAAGCAGCTCCAACATCGGATATGCGACTGT11.1494252873563218No Hit
GATAAGTACAGCATGACTTGTCAATGAGACACACAACACACCCCTCTGAAAAAACATAAACAAGCTCCCAAATGA11.1494252873563218No Hit
CACAACCACCAACCTCATCCAAAAAATAATATACACATGAAAGAAATAAGTATCAAATACAACACTCAGCACCCT11.1494252873563218No Hit
CAACCACACACACAACCTCCCAACCAATACACTCACACCAAATAACCACC11.1494252873563218No Hit
CACACATCAATTGGCCTCTTACCCATTATCCAAATGGGACCAACCCCAATTGCGCACAAACAGCTCAAAAATCAA11.1494252873563218No Hit
CTTATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGT11.1494252873563218No Hit
GAATAAAAGATAGAATAACACAAAGTATAACTTGCTGGAGCACATTTACTC11.1494252873563218No Hit
CAACAAACTCAAAAACACTGACAACAAGCCCTCACTGACCCAATAAAAGA11.1494252873563218No Hit
AAATTCAACAGCATCGCAGCAGCAAAATACTAAAAACTCTATCATCAGTAGATTAAAAAAAAAAACTATAA11.1494252873563218No Hit
CACCAAGGATCCTAAACAATTGTGAAACAAACAACAAAAATTACATCCCA11.1494252873563218No Hit
CTATGAAACACACAGGGTTCTAGATTTGAACTCTGCTGTGATGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGG11.1494252873563218No Hit
GGAGAGTGGAGACTGAGTCATCACAACATCCCCACTGGATCCTGGGA11.1494252873563218No Hit
GTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATGAAGACAGATGG11.1494252873563218No Hit
ATACAGCACTCAAAGTAGAATTATAAAGAACATCATGTAAATGTTAACAATATTAAAACCCTACATTTATTGCAT11.1494252873563218No Hit
GAATTAAAATACCATACGAAAGTAAAATTGATACTGGCACCTGTCGAAGATACACTCAATCAGTTTAATAACT11.1494252873563218No Hit
CCATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGT11.1494252873563218No Hit
AAATATTCCCATATAACAAACTGGAACCAACTAGTGCTCGCATTCAATGTCGTCACGAAAAAAACTGCTCTAA11.1494252873563218No Hit
GTAAATTGGTATCAGCAGAAGCCAGGGAAAGCCCCTAAACTCCTGATCTA11.1494252873563218No Hit
CAAATACGCATCACCGACCACACAAAAAAATTATAAAGGGATTAAGACGTATAATGATAAAAAAAAAAAAG11.1494252873563218No Hit
GTCCGCCTGTTCCATCATGTTTGGTGATATCTCCTCCTTGGCAAACAAAA11.1494252873563218No Hit
GAAAACAAATCCTCAAAAAAACATAAAAAAATAACCCACACTCATAACCAACACTGTCTCATAAACAAATCTCA11.1494252873563218No Hit
ATAAAAACCCATACAACTTTATAAATTTAATAATTATAAAAAAATTTTTG11.1494252873563218No Hit
CAGTATTCAACAGTGCAAAAAAATCACAAAACAAGATACAAATCCACAAA11.1494252873563218No Hit
GTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCAGTCT11.1494252873563218No Hit
GTCACAGCAACAGCATCATCACAAGCCCCCAGGAAAACAGGAGCCTTCACATCCACAATAAATCCACATCCATGT11.1494252873563218No Hit
CAAATAGACCGGAGACCAAAGTCCCAGATCCGAAACAAAAAAAGACAAAAAAAATTTTTTCAAATAAAATG11.1494252873563218No Hit
GAAAACGACCACCACTGAGGAGATCAAAAACAACAACTCCACAAAAGAAA11.1494252873563218No Hit
CATATAATTAAGAAGTGATTACCTAATAAAGATAACAATGTGACTATTTT11.1494252873563218No Hit
TGTGAAAGCCCAAGAAGATGAAAGGATTGAACTTGTTGACAACAAAAGTAAGTGTGCCCGGATTACTTCCAGGAT11.1494252873563218No Hit
CTTATACACATCTCCAGCCCACGAGACACTGAGCGATGTCGTATGCCGTC11.1494252873563218No Hit
CTTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGT11.1494252873563218No Hit
CTAAAAAACATAAACTATCACCTTCCGAAAACCGACACAAAAGTACATAAAACTAAATATGGATCCACCAT11.1494252873563218No Hit
AAGCCCCAACTCTCATTTCAGCAAAACTATACTAAACAACTGGATGAGAT11.1494252873563218No Hit
GAAAAACTTATATCCCAGATAGGCCAAAGTACAAACCAAGCACGAAAAAGCACTCCAAACGGGTAACACCCAGTA11.1494252873563218No Hit
ACACAGTCACTCAAAAAGAGAATACACACAACAACCGCCAACTCCACATC11.1494252873563218No Hit
GGCAACAAAACATGACCAATTCATATAAATTAACACTAAAAAAATCACACAAATATAAAGACTTTGTTACCTGCG11.1494252873563218No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGT11.1494252873563218No Hit
TACAAAGACAACCTCAAGCTCACAAACTACCTCAAGTAAAACAAAATGAAGCACAACTTAGTGCACAAACACAAT11.1494252873563218No Hit
CTCACACCACATTGAAAAATAGAAGCACAAAAAAAAAAGAACATACAGCCAAACCCTCAAAGTTAAT11.1494252873563218No Hit
CAACATTAATAAACACAAAGTAATCAAAATTTATAACAATCAAATATAAAAATTACTATTATAAAAATAACAAAG11.1494252873563218No Hit
ACATACAAGATTTATATGTTATTATGTTTTAATCACAGATTAATTTAATC11.1494252873563218No Hit
GGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCT11.1494252873563218No Hit
GATCAAGTCAACCCACTTGGGCCGTGAGATTTTATAAAAAATTAACTATCTCAAGTCTCAAATGTAAACTCAACA11.1494252873563218No Hit
GATATCAACAGCTCATCAGATGGCCGGAACATGAAGACAGATAGTCCAGCCACACAACCTTTAATCACCAGTATT11.1494252873563218No Hit
GTACGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTACCAGCTACTCGGGAGGC11.1494252873563218No Hit
CTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATCTCCAGCATGGCCAGCTTCCCTCTCCTCCTCACCCTC11.1494252873563218No Hit
GAACATTTTATTACACCTCCTGATTTTCACTCCTTGAGTTTTATTTTCTC11.1494252873563218No Hit
TATACACATCTCCCAGCCCACGAGACGCGTAGTAATTTAGTATGC11.1494252873563218No Hit
CATTATCCAGGAAATACAAGAACAACACACACAAAAGCAGCA11.1494252873563218No Hit
ACCCTGGACTCGCCACTGGTACCCGCCCTTCCGAGCGGCGCCTAAGCCTT11.1494252873563218No Hit
GTATGTGTCACCACCTCTACCAATAGCTGAGACCCACTCCAGACCTTTGC11.1494252873563218No Hit
TAAAAAAAAAACAGTACTAATTAATAATTTTAAAATTAATAATTAACCAGGCACCTGATTGTG11.1494252873563218No Hit
TTGAAGAGGCGGGCATAACACAGCAAGACGAGAAGAACCTATGGAGCTAT11.1494252873563218No Hit
GTTCAGAACATGCTGATAATATTAATGAAATTGATTATCAAAACCAAAAAAACCAAACTATTATACAAATAT11.1494252873563218No Hit
CTCCAATATTCAATCTCTTTGTAACAGACAACCAAACCCACTGATCCTTCACATCTAATCACAAGACTTTGTGTT11.1494252873563218No Hit
CAACTCATCAGCCACTCATAAAACGTACACTCTGAACTTATACGA11.1494252873563218No Hit
CAATCAGGTTTACAAACATCATCCCTCATACAAAGTAAAGTCAAAATTCA11.1494252873563218No Hit
AAAACTAGAAGAGACTGAAAAAGATTTCAACCCAAACAAAACATTAACAGACACTCCACCTGACACTTAT11.1494252873563218No Hit
GCAAATGCACACAAAGGAGACATCGCACTCATAGACAAATTGATTCACAT11.1494252873563218No Hit
GTGACACATGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAAATAGGGAC11.1494252873563218No Hit
CATAGACAATGTTTGGAATACACGCAAAGCTGTCTAATCTATTATTACAGAACCCCAGAGGCATCCACTCTTGG11.1494252873563218No Hit
CTCAATGGAGTAACCACAGACCAGGTCCAGCCACACCCAAAACAGTAAGTTCCCAACACATACAAA11.1494252873563218No Hit
GCATGCAGGAAATGAGATTGACTAAGTGAAAGAACACATTCCCATCTCCATACCATCCTTATTCTGAGCCCTAAT11.1494252873563218No Hit
GGGGTTGGCCTTGGGCTGACCTAGGACGGTGACCCTGGTCCCAGTTCCGAAGACATAAAAGACAAAAA11.1494252873563218No Hit
CACCAGGGACAACGCCAACAACTCAGTGTTTCTCCAAAAGGACAACCTGAGACCCGACGACACGGCCGTCTAATA11.1494252873563218No Hit
AACTTCAAAATAAATAAGCATCAAGCCTCCTAATGGTTATAGTGAATTAT11.1494252873563218No Hit
ACAAAAATCAAAAAAAAATCCTAAATATTGTACCACACAAAAAAAGTCAGAAAAACTCAAATACAA11.1494252873563218No Hit
CAGATACACATCTCCGAGCCCACGAGACAGGCAGAAATCTCGTATGCCGT11.1494252873563218No Hit
CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGT11.1494252873563218No Hit
CATTGGAAGCACCCACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAATTGAGACGTCCAAGAACCAGTT11.1494252873563218No Hit
CAAATAAACAGCAGTTTCCCAGTCTGTCATCCTGAACATATGAACATAAA11.1494252873563218No Hit
TATACACATCTCCGAGCCCACGAGACGCGTAGTAATGTAGAATCCCCTCA11.1494252873563218No Hit
GAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCCCTGGGATCC11.1494252873563218No Hit
GTTAATACCATTTAAAATTGACATATTGAATAGTAACAAAACAGAGAAAT11.1494252873563218No Hit
TTCCAAGGCCACGGCTCTTTCGGCCTGCAGATGTCAGCCCACGCATCTCC11.1494252873563218No Hit
CCTATGTCTGATGCTATATTGCTAGTATTTCTATTCAGGTTGGAATTTGG11.1494252873563218No Hit
AACTCAACTCAACATACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCGGCCCATGTAT11.1494252873563218No Hit
GGTAATTACTTATATTATTACGGCATGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTT11.1494252873563218No Hit
AAATCAACGCAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAATGATAACGCAAAAAAAAATACCACAGCCC11.1494252873563218No Hit
CCTCCAGAGGACACTCTCATCAGCCCGAGCTTTTGTTACAACTTAGAGACCAACAGCCTGAACTCAGATGTCAG11.1494252873563218No Hit
CACATATGACACACAGACCACTCTGACCCGGCACCAGACATCCAACAACC11.1494252873563218No Hit
GAATAAAAGAATATTAATTTATATATTTTATAATATAAAAAGCCCCAGAATTCCCAGGAGTTTCCATTCGGTGAT11.1494252873563218No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)