FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004688062

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004688062
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1638771
Sequences flagged as poor quality0
Sequence length20-76
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG63600.3880957131899454No Hit
GTAATACACAGCCGTGTCTGCGGCGGTCACAGAGTTCAGCCTCAGGGAGA40650.24805174121338489No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT27650.16872400109594324No Hit
GTACACAATTTCCCCTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAA25330.1545670505519075No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC24310.1483428740196159No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC22510.13735903308027786No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC20830.12710744820356232No Hit
GTGTATTACTGTGCGAGACATGAGAGAAGTGGATACACTTTTGATCTTAA20580.12558191473976535No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA18790.11465909513897915No Hit
GTAATAAACCCCGACATCCTCAGCTTCCACCCTGCTGATTTTCAGTGTGAAATCTGTCCCTGCCCCACTGCCA18370.11209619891980026No Hit
GTTTATTACTGCATGCAAGGTACACAATTTCCCCTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAA18170.1108757721487627No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC17880.10910615333075822No Hit
GTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTT16900.10312606215267417No Hit
GAGTTTATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGT16730.10208869939729223No Hit
CAGTAATACACAGCCGTGTCTGCGGCGGTCACAGAGTTCAGCCTCAGGGA16650.10160052868887723No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)