EGAF00004688669 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004688669
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1144514
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTACTGTCAGCAGTATGGTAGTTTACCTCCCACTTTCGGCGGAGGGA	2269	0.19825008693646387	No Hit
CTTATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGT	2010	0.17562039433331528	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	1587	0.1386614755258564	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1542	0.13472967565272248	No Hit
GTATGGTAGTTTACCTCCCACTTTCGGCGGAGGGACCAAGGTGGAGATCAAGCGAACTGTGGCTGCACCAT	1438	0.1256428492792574	No Hit
CAGTAATACACTGCAAAATCTTCAGGCTCCAGTCTGCTGATGGTGAGAGCGAAGTCTGTCCCAGACCCACTGCCA	1416	0.12372063600794747	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	1206	0.10537223659998916	No Hit
GTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCA	1177	0.10283841001508062	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	425	42.07507	40
CGTATGC	465	41.52534	41
ATCTCCG	600	39.72917	10
GGTATCA	1240	39.53407	1
TATGCCG	530	37.946613	43
ACGAGAC	645	37.48772	22
TCTCCGA	640	37.246098	11
ATCTCGT	395	37.13126	37
CCCACGA	640	36.19849	19
TATACAC	715	36.159718	3
CTTATAC	670	36.08262	1
ATGCCGT	550	36.01917	44
CGAGACA	665	35.86467	23
GTATCAA	2785	35.204487	1
GATCTCG	465	32.945778	36
GTATGCC	620	31.797169	42
CCGAGCC	740	31.75775	14
TTATACA	775	31.627256	2
TCCGAGC	745	31.544611	13
TCTGTCG	295	30.728697	8