EGAF00004688672 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004688672
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	583086
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3035	0.5205064090031316	No Hit
GTATCAACGCAGAGTACGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCC	1299	0.2227801730790998	No Hit
ATCCCACTACTGATCAGCACGGGAGTTTTGACCTGCTCCGTTTCCGACCT	1023	0.17544581759809016	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	950	0.16292622357593906	No Hit
GTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGACCA	924	0.15846719008859755	No Hit
CTACTGATCAGCACGGGAGTTTTGACCTGCTCCGTTTCCGACCTGGGCCG	911	0.15623767334492683	No Hit
GGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCA	781	0.13394250590821938	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAGCGGCTGCAC	756	0.12965497370885257	No Hit
GGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGACCTGCTCCGTTTC	709	0.12159441317404293	No Hit
GAGTACGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGG	669	0.11473436165505603	No Hit
GCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGAC	659	0.1130193487753093	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGGTAGCATAAT	651	0.11164733847151191	No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC	626	0.10735980627214511	No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC	592	0.10152876248100623	No Hit
ATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGAC	591	0.10135726119303155	No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCACGGGGGG	589	0.1010142586170822	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATGGGT	20	0.0063920915	53.62278	49
CTAACGC	50	5.0397684E-6	39.79307	3
GGTATCA	1525	0.0	38.5115	1
GTATCAA	3810	0.0	38.23196	1
TGGTACG	80	0.0035776005	32.307487	70
AACGTCG	55	2.7425928E-4	32.29265	47
ACGTCGT	45	0.003941117	31.679808	48
ACGGGTA	440	0.0	31.672594	16
TAAAACG	45	0.00419455	31.279053	44
AATCCGA	45	0.004795885	30.434273	37
ATCAACG	4835	0.0	30.108856	3
TCAACGC	4840	0.0	30.075172	4
CGCAGAG	4805	0.0	29.951775	8
CAACGCA	4905	0.0	29.746773	5
AACGCAG	4925	0.0	29.625975	6
CCGCAAC	45	0.005584248	29.50165	17
AGAGTAC	4890	0.0	29.159883	11
ACGCAGA	4995	0.0	29.14441	7
GCAGAGT	4920	0.0	29.116879	9
CAGAGTA	4930	0.0	28.990555	10