FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004689210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004689210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98
Sequences flagged as poor quality0
Sequence length29-76
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCAAGGACTTCCCGCAAATCCACAATTTCGCAGGCACTCTCACCAAGCT11.0204081632653061No Hit
GACAAGCGCTTTATGACTTGGGGTCAGAAGAGATACCCCTCCCCTGGGATCCACCAGATCAAATCTCCCTTGGTG11.0204081632653061No Hit
CCCTTCTTCCAGTCCTCGGCTGCCACGCGCAGTATGCTGGTCACAGCGAAGGTGGTGGTGCCCTGGCTGGGCTC11.0204081632653061No Hit
ATATTATACTATTAACCTCACATTCCCCCCAGCTAAAAAATTTTAAATAAAAATAACAGTGGATGCACCAT11.0204081632653061No Hit
AAGACAAGATGAATCAGGATACCTCAAACCAACCCTCAGCAATCACCAACACCAGGCCACACACAACATAGAAGA11.0204081632653061No Hit
GGAAGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGTGGGCACTTCTCCCTCTAACCCTCTCCCCTGTTGAAG11.0204081632653061No Hit
GGTGGTGGTGCCCTGGCTGGGCTCCTGCCGGGATGCCCAAGTCAGGTACTTCTCGCGGGGCAGCTCCTGTGACCC11.0204081632653061No Hit
CGCAATGGAGGTCGAAGTAGGCACGGCCGGGACAGTGAAACGGCTGCGGGCGACTGAGAGCATTTCGGGGTCCTG11.0204081632653061No Hit
GAGGTGTTTTTTTACTTGAGGAATATCTCAAAGCGAGCCATATTTGATGAGATCGATAGCTG11.0204081632653061No Hit
ACGGGGGGGTCGGGGGGTGCTGCAGGGTGGGCGGGGGCCGGCGGGGATGG11.0204081632653061No Hit
CCTCCACTCCATCCTGAAGGCTACCAACTACAATGGCCACACGTGTCTACACTTAGCCTCTATCCATGGCTAC11.0204081632653061No Hit
CACAAACACAACCCCACACCAAACAACCAACCAACAATTACCACGCCAGACACAAACAGCTACAACAGCCTAAA11.0204081632653061No Hit
TTCATTGGCAGCGCGTCTCAGACAGAAGTCACTCAACCCATCACCAGCCTGCAGGCTAAAGAATTGGCAG11.0204081632653061No Hit
GTATCAACTCAAACTAATTTATTATTTTTTATTTTTTTTTAATAATGTAGAAAACAAGAGACACAACAAAAAAAA11.0204081632653061No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0204081632653061No Hit
CATCAAGATACCTCCCAGAAAGAGGTAGCTACGGCGCCTGGCATAGAGTGCACTGAGGGTGAAGCAGGTAAAGAT11.0204081632653061No Hit
AAACACAACCAGTACAACCCCATACACTAACAGCGCAACATCCAACATCATACAATAATTTACCACAGGACCCA11.0204081632653061No Hit
ATGAACAGCATGTTGGACCAAATCATGCAAAATCACCACCAGCACAACAA11.0204081632653061No Hit
GGGCAGGGAGAGGGGCTTGATGCCTGGGGGTGGGGGGAGAGACCCCTCCCCTGGG11.0204081632653061No Hit
GTTTATTACAGCTCCAACAATAAGAACTACTTAGCTTGGTACCAGCAGAG11.0204081632653061No Hit
CATCAGTGCGTGGCAGAGGAGCGCGCTGGACGCCACAGTTGGGCTCGGAGAGTCCTGAAGTCGGACTGGGTTGGT11.0204081632653061No Hit
CCACTGAATAAACTGCAAGAAGACGTACGCGGTACAGAACAACGTCACCACAAACGACATGAAGGCCGACTCC11.0204081632653061No Hit
CCACTCCCGCCTTGACGGGGCTGCTATCTGCCTTCCAGGTCACTGTCACG11.0204081632653061No Hit
GGATTCACCTTTACAACTTATTGGATGAGTTGGGTCCGCCAGGCTCCAGG11.0204081632653061No Hit
GTAATGGAACCAACTACAAAAACACACAATCATAATCAACTCACAAAGATAAATCAAACCAATTCTAATTA11.0204081632653061No Hit
CCCCCATCAGGGACTGAGCTCGACCGTCACAACGAG11.0204081632653061No Hit
GAACAAAGATAACAAAACATGGAGATTGGTCAGACACAATCACATAAACACATCTAAAGCAGCCGAAGATCTCAT11.0204081632653061No Hit
CAGCTGAGATAGCCCTAGGCACCCAGGGAGGCAGAGCCAGAGCCCGAATGCGTCAGCACAAGCAGGGAGAGAGAC11.0204081632653061No Hit
GTATTATATCTGTCTGGGCTGCAGGCAGGCCGGCTGTGAGAAAAGAGTCAGGGTTCCGCAGGTCAGAGAG11.0204081632653061No Hit
CACCTAGCCAGGATGCCTCCGGGGACCTGTACAC11.0204081632653061No Hit
CCCTAGGAAAGGGCCAGGTTCCCTCTATCCAGCTGGGGGCACCGAGACGGCCTCATTCAGGGAAGTCCAGGATGG11.0204081632653061No Hit
GTCACGAAACACCAACCACATGAGGAACCCCGCTCAGCACCAGCGGCACCTGCTACAAAACCACCCACCTCCCA11.0204081632653061No Hit
AACATCACATTATCATCCACACCTGAACCCAGAAAGCGCACAAACTAAA11.0204081632653061No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCGGGGGGGGGGGGGGG11.0204081632653061No Hit
CAGTAAATGAGTACCTTAGGAGGCTGTCCTGGTCTTTGATGGTACCAAGCTAAGAAGGTCTTATTGTTGCCA11.0204081632653061No Hit
AGCTGGGAGAGAGACCCTGTGCAGTGGAGGAGG11.0204081632653061No Hit
GAGCATTGCTCAGAGTAGAAAGATGAGATGGAGTAAAGCAATAGTCGTAG11.0204081632653061No Hit
CTGCTGAATAACTTCTATCCCAGGGAGGCCAAAGTACAGAGGAAGGTGGATAACGCCCTCCGATCGGGTAACTCC11.0204081632653061No Hit
GAAAAAACATCGGTCAACGCCTCACACTCAGCAAAAATCAACGAGCAGGACAACCCATGCAACCATCGCTCACCA11.0204081632653061No Hit
CTTGGAGCCAGAGAATCGGTCAGGGACCCCTGAGGGCCGATTCGTGATAC11.0204081632653061No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTTTGCACCCTCTCGATTCACC11.0204081632653061No Hit
GTAACCATCAAAAAAATCAAACATAAATCATTAAAATACACAATCTAAGTATACAAATACATCACTTCCATAAA11.0204081632653061No Hit
CTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAAT11.0204081632653061No Hit
GATATATATTTTGTGTATGATATAAGAGAAAGGCTGAATATATCATTCCCTGTGTATTGTCATTTGTCTGAACA11.0204081632653061No Hit
CTCTAAGAAGAAACATATACCAAAACAAAAACTAAAACCATATCCACAAT11.0204081632653061No Hit
ATGTACATATCTACTCATCACTCACCAACAACAACCTCAGACAAGATATTCAAGAACCCAGGGGCCAGCAATCT11.0204081632653061No Hit
GGGCAGACTAGGGCTGACCTAGGACGGTCATCTTGGTCCCTAAGCCTAACACATGAAAGCCAGTGCCCAACGA11.0204081632653061No Hit
GACCTGGAGCGAAAGCGGACAGGGCGTGACCGCCAGAAACTTCCCACCCAGCCAGGATGCCTCCGGGGACCTGTA11.0204081632653061No Hit
GCTCCCGGGAGGTCACCATATTGATGCCGAACTTAGTGCGGACACCCGATCGGCATAGCGCACTACAGCCCAG11.0204081632653061No Hit
AGATCGTCTAACCCACTCACCCATTTACCACAGTGGACAAACCCTTATAG11.0204081632653061No Hit
GATAGTCAAAAGATTTAGAAGTCTCCATATGATAACTGGAGAGTGAAGATGAGTCGTTGATTT11.0204081632653061No Hit
GGAAAAGAGATCTAGGTTGGAGATTTAGGAGTAACCATAACTGATCATTTCAAGCAAATACTGGGAATTCTTC11.0204081632653061No Hit
CGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCA11.0204081632653061No Hit
CATCACAAAAGATGGAGAACACAAAAATCTTAAAAAATACACATATCTCC11.0204081632653061No Hit
ATGCCCGCCTCTTCACGGGCAGGTCAATTTCACTGGTTAAAAGTAAGAGA11.0204081632653061No Hit
CACAGGATCCACTCTGACTTACCTGGAGATAAAGATGACAACCAATGAAC11.0204081632653061No Hit
ATTCCGGCCCGAGGTCCACCTGCTGCCGCCGCCGTCGGAGGAGCTGGCCCTGAACTAGCTGGTGACGCTGACGTG11.0204081632653061No Hit
AACGTAGGCAGGGTGAGGCATTAGCTAGAAGAGCCAGAGCATGCAGCAGATTTAATGCGCGATTTTAAAGCATT11.0204081632653061No Hit
ATCATCCAACAATAAAAACAATTCTTATTATAATATACCAAAACCAAAAT11.0204081632653061No Hit
CTATAATACAAGAACCATCAATTCCAATACAAACAAAACACTAATAAAAC11.0204081632653061No Hit
ACGATGCAATATGCTGATTTACTAGCCAAA11.0204081632653061No Hit
GGGGAGAGTGTTAGAGGGAGAAGTGGGGG11.0204081632653061No Hit
CATCTCAACCTAAACAATTTTTACAGAATACCTAAAAAATTAACACAAATAATCTTATAAAAATATAACTCTGAA11.0204081632653061No Hit
CGACACGCAGTTCGTGAGGTTCGACAGCGACGCCGCGAGTCCGAGAGAGG11.0204081632653061No Hit
TATCCACGCAGAGTACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.0204081632653061No Hit
ATTATGACGGGGAAGAAGGCGCGCGGCAAAGAAGCCGGTCACCACCACCT11.0204081632653061No Hit
CGGGGATGCGCGTCTGCCGCTGCCGCCGCCGGAGAGAGGGGAGCTCTCGGGGGTCGGGGGGTCGTTAACGGAGGG11.0204081632653061No Hit
ACATCTAAGATAGAGTTTATATAATCTAACACCAACAAGATTTGCAATATTAAAACCAAGAAGGACATCGCCG11.0204081632653061No Hit
CCTAAGACCAAAAAGTGTGGCCGTGTTGCGTTGCCGCTCATCAGAGGAGA11.0204081632653061No Hit
GTCCACTGCTTCAACACCCAGGAACCAATCAGAGAGACATAGAGCTAACGCGTAAACACAGATACCGCAACCAA11.0204081632653061No Hit
GTAGAGGGGGGAGGAGGGGATGCAGGTGGGGACTGGAGGCCGGGGGTAGATGGGGGAGGGGGAGG11.0204081632653061No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT11.0204081632653061No Hit
GCAGCCTGCAGGCTGAAGATGTGGCAGTTTATTACTGTCAACAATATTAT11.0204081632653061No Hit
AGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGT11.0204081632653061No Hit
ATATCAAAGTCTGCAGTTAACCAAAGAGAAAACATAATTTTCCGACCAATAGGATGTATGGGGGTCAAAGAACG11.0204081632653061No Hit
AATTACCCAGTCGCGACGCGGGGTGGTAGTGGGGAGAAATAACAGTACGGGACTCTGGCGGGGCGCTGTAGTTG11.0204081632653061No Hit
CTCTTAGTAGGGGCTTGATGGGCCGGTCGGGGGGGGGGAGGCGGGATGGGGCGCCCACCACTTTTTCCGTTT11.0204081632653061No Hit
CCAATAAAAACTACTTCATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.0204081632653061No Hit
CCGAGAGGAACTAGGACAAGACCACAACTAAACCCACACTGTAAAACGAGTAAATCGTCATGTCCGACACAG11.0204081632653061No Hit
GGTATCAACGCAGAGTACGGGGCTACAACAGGCAGGCAGGGGCAGCAAGA11.0204081632653061No Hit
CTCCAACAACTCCACCTACGCATTCTACATCATGGTTCCACACAAGAATGTCACTGCACCGACAGTCAATCGA11.0204081632653061No Hit
GCTTCTCTAAGGCTTCTCCAAATAAAAAAAAAAAAAAAAAAAAAAAAAAA11.0204081632653061No Hit
CAGCTCCTCCGACGGCGGCGGCAGCAGGTGGACCTCGGGCCGGAATGTGT11.0204081632653061No Hit
CAATATGCGTAGGACCCCGGTGCAAACAGCGTCAGCGCCACAATGTTGGCTGGGGCTCACGCTGGAACTGAGTCG11.0204081632653061No Hit
GAGTGAAATAGAGGTTCGCTTCAGAACCTAAGAGCAGTTCCACGAGGCCCGGT11.0204081632653061No Hit
GACCTGTACACCACGAGCAGCCAGCTGACCCTGCCGGCCACACAGTGCCT11.0204081632653061No Hit
GGCTGTGTCTTACATATAAAAGACCACTGAGATCTGGGTAGATCATGACTCCTGATTGGTTAAGACGACACTGTG11.0204081632653061No Hit
CAGCAGAGAAGTCTGTCCCAGACCCAATGCCACTGCTCCAGTCTGGGATG11.0204081632653061No Hit
CACATGCAACGTGAACAACTTCCCGAATCACATCAAGGATCTGAAAGTGCCATACCCAGTTACCTCACCACCAA11.0204081632653061No Hit
AAGTAGTAAAATAATGCTTACAGAAAATAACTGCAACATCTTCACCCAGCAACCTACTGATCCTCATAGTGAAAA11.0204081632653061No Hit
CTAAAATACATCGCAACAACCCCGCAATAAGCTGTACCAAACCAATTAAGTGGATACCTATCTGGGCAACATAA11.0204081632653061No Hit
CTACGGCTACATCGATTAACCTCACACAACCAAAAGCTTCACACAAATATTAAACCAACCAAGTCAAACAACGCA11.0204081632653061No Hit
CTGCTCCAGTCACAAGGACTCTGATTGGTTCAGACATGATTGAAAACTGCGGG11.0204081632653061No Hit
GTAAAAATAACACTCAAAAAAACACTGTAACCTCAACATCCTAATCAAAC11.0204081632653061No Hit
CCATTCCACATCGTCACAGAGCATCAGAGACAGAAGGTGCTCACCTTGATCACCAGCACTGACACACTCTCATG11.0204081632653061No Hit
GTAACAAATACCATACACCTCCACCAAAACAACCAACAAAAACACATCCTTTCTTTTAAACACAAATCCCT11.0204081632653061No Hit
GTTCTGGAACTAGGTAGTGGTAACTCCTGCACAACATTATGAAGTTTCTG11.0204081632653061No Hit
TAATACACCTAACAAATCTCCATCAACAACACCTACAACAAATCCCAAATGCAGACACCCCCCACACAAA11.0204081632653061No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACAAATA50.069.043
CTTCACA50.069.037
AAACCAA50.069.052
TTCACAC50.069.038
CCAACCA50.069.055
AACAACG50.069.067
TCGATTA50.069.012
TAAACCA50.069.051
AGCTTCA50.069.035
AAACAAC50.069.066
CCAAAAG50.069.030
GTCAAAC50.069.063
TACGGCT50.069.02
CACAACC50.069.025
CACAAAT50.069.042
AAATATT50.069.045
ACCAAGT50.069.058
ACCAACC50.069.054
ACCAAAA50.069.029
AACCTCA50.069.018