EGAF00004689511 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004689511
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	670164
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGT	3766	0.5619519998090019	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC	1502	0.2241242442148489	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1101	0.16428814439450642	No Hit
GGGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCCCTGGGATCCTGCAG	980	0.14623286240382952	No Hit
GGGCAGCGCTGGGTGCTTTATTTCCATGCTGGGCGCCCGGGAAGTATGTA	949	0.14160712900125938	No Hit
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCCCTGGGATCCTGCAGCTCTAGTCTCC	889	0.1326540966091882	No Hit
GGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCCGGGGAGCGGGGGCTTGCCGGCCGTCGCACTCATTTA	885	0.13205722778305012	No Hit
GGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCCCTGGGATCCTGCAG	792	0.11818002757533977	No Hit
CATTTACCCGGAGACAGGGAGAGGCTCTTCTGCGTGTAGTGGTTGTGCAG	779	0.11624020389039101	No Hit
GAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCCCTGGGAT	752	0.11221133931395898	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGGTAGCATAAT	724	0.10803325753099241	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCC	715	0.10669030267218174	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAGCGGCTGCAC	672	0.10027396279119738	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	535	0.0	70.4728	70
TTATCGG	40	0.007546729	51.41311	70
GCCTAAT	75	3.5459525E-5	45.700546	70
CGCGTAT	35	0.0013659262	39.319126	39
CGTCTTA	45	8.839269E-5	39.151894	48
TCTCGTA	650	0.0	39.051075	38
ATGCCGT	805	0.0	38.560505	44
TCGTATG	825	0.0	38.489933	40
CTCGTAT	680	0.0	38.451794	39
ATCTCGT	670	0.0	38.300674	37
CGACCGA	35	0.0015627521	38.25684	18
CGTATGC	815	0.0	38.212234	41
TATACAC	945	0.0	37.896957	3
TGCCGTC	775	0.0	37.891388	45
GCCGTCT	760	0.0	37.846104	46
GTATGCC	865	0.0	37.315826	42
AGGTACG	45	1.1967287E-4	37.1886	2
ACGACCG	45	1.1967287E-4	37.1886	17
AGACTGC	960	0.0	36.664986	25
CCCACGA	965	0.0	36.42601	19