FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004691492

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004691492
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10509
Sequences flagged as poor quality0
Sequence length20-76
%GC89

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG739370.34922447426015No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG890.8468931392140071No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG200.1903130649919117No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)