FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004691619

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004691619
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95808
Sequences flagged as poor quality0
Sequence length20-76
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGT11171.165873413493654No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCC2300.240063460253841No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2260.2358884435537742No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT2200.229625918503674No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1870.1951820307281229No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT1600.16700066800267202No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1460.15238810955243823No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1420.14821309285237141No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT1370.1429943219772879No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1360.14195056780227122No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT1250.1304692718770875No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT1240.1294255177020708No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1230.1283817635270541No Hit
TCTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCG1210.12629425517702073No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT1130.1179442217768871No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1130.1179442217768871No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1110.11585671342685372No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1040.10855043420173681No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1030.10750668002672009No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1010.10541917167668671No Hit

[OK]Adapter Content

Adapter graph