FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004691620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004691620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95808
Sequences flagged as poor quality0
Sequence length20-76
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19392.0238393453573815No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT2350.24528223112892453No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2210.2306696726786907No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT2150.22440714762859051No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1960.2045758183032732No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT1780.18578824315297263No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1460.15238810955243823No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT1460.15238810955243823No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT1360.14195056780227122No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT1320.1377755511022044No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT1280.13360053440213762No Hit
GTATCAACGCAGAGTACGGGTCTGGTGCAACGTGGGGGCTGGAGGGTGGG1240.1294255177020708No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1070.11168169672678692No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT1060.1106379425517702No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1050.10959418837675351No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT1010.10541917167668671No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT1000.10437541750167002No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT990.1033316633266533No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT960.1002004008016032No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)