FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004691706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004691706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences169309
Sequences flagged as poor quality0
Sequence length20-76
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG62453.6885221695243606No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT3950.2333012421076257No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3820.22562297338003298No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT3610.21321961620469082No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT3030.17896272495850782No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2690.15888109905557293No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT2410.14234328948845013No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT2330.13761820104070074No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT2200.129939932313108No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT2170.12816802414520198No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2010.1187178472497032No Hit
GTATCAACGCAGAGTACGGGTCTGGTGCAACGTGGGGGCTGGAGGGTGGG1810.10690512613032975No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT1760.1039519458504864No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTT1760.1039519458504864No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT1720.1015894016266117No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)