EGAF00004691789 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004691789
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	455242
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1423	0.3125810008742603	No Hit
GTATCAACGCAGAGTACGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCC	978	0.21483079329235877	No Hit
ATCCCACTACTGATCAGCACGGGAGTTTTGACCTGCTCCGTTTCCGACCT	969	0.2128538228019383	No Hit
GTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGACCA	803	0.17638970042307167	No Hit
CTACTGATCAGCACGGGAGTTTTGACCTGCTCCGTTTCCGACCTGGGCCG	741	0.16277057037795284	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	707	0.1553020151919199	No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGT	608	0.13355533979729461	No Hit
GAGTTTATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGT	550	0.12081486330347375	No Hit
GCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGAC	538	0.1181789026495798	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	535	0.1175199124861063	No Hit
TCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTTAGTGCGGACACCCGAT	518	0.11378563489308983	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	514	0.11290698134179185	No Hit
GGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCA	495	0.10873337697312638	No Hit
GGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGACCTGCTCCGTTTC	486	0.10675640648270592	No Hit
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCCCTGGGATCCTGCAGCTCTAGTCTCC	465	0.10214347533839144	No Hit
GAGTACGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGG	460	0.10104515839926896	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAACGGC	20	0.005360429	56.059505	55
CGACTTG	20	0.006422577	53.556065	45
GACGCTC	95	0.0	44.550323	26
TATCGGT	30	8.586265E-4	43.20775	13
CGTATGC	90	1.8189894E-12	42.627148	41
CGAGACG	120	0.0	40.574116	23
TCGTATG	95	5.456968E-12	40.047478	40
GGTATCA	1880	0.0	38.443027	1
TCCGAGC	130	0.0	37.39132	13
GTATCAA	4705	0.0	37.196728	1
GAGACGC	125	0.0	36.37842	24
ACTATCG	45	1.4464893E-4	36.00646	11
CTTATAC	140	0.0	34.724327	1
TCCAGAC	40	0.0029314947	33.651478	35
CTCCGAG	135	0.0	33.606026	12
TAGGTTG	45	0.0033742352	32.698532	51
AGGGGGG	240	5.2750693E-11	32.606377	70
AGACGCT	140	0.0	32.516533	25
TATACAC	160	0.0	32.40937	3
TCTCCGA	140	0.0	32.40581	11