EGAF00004692047 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004692047
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	209333
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGT	890	0.4251599126750201	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	499	0.23837617575824163	No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA	407	0.19442706118958789	No Hit
GTGCTAGAGAATACGTACCATGAAATACATATATTTCATAAGGTTCAGTT	323	0.15429960875733878	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG	322	0.1538219009902882	No Hit
CCTCCAACATTAGCATAATTAAAGCCAAGGAGGAGGAGGGGGGTGAGGTG	317	0.15143336215503528	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	312	0.14904482331978236	No Hit
TGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGG	267	0.12754797380250604	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	259	0.12372631166610137	No Hit
ATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAG	257	0.1227708961320002	No Hit
ATTAAAGCCAAGGAGGAGGAGGGGGGTGAGGTGAAAGATGAGCTGGAGGA	243	0.11608298739329204	No Hit
GTTCCAGCCTGACCCCCTCCCATCCTTTGGCCTCTGACCCTTTTTCCACAGGGGACCTACCCCTATTGCGGTCCT	237	0.11321674079098852	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	235	0.11226132525688735	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	234	0.11178361748983676	No Hit
GTATCAACGCAGAGTACGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCC	232	0.11082820195573559	No Hit
ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGG	229	0.10939507865458384	No Hit
GGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAG	216	0.10318487768292625	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGTAT	20	8.3407474E-5	69.257744	39
GTCGTAT	20	8.3407474E-5	69.257744	39
CGTTTAA	20	0.0048116823	57.596493	56
TATCGTA	25	2.603632E-4	55.019444	38
TGTCGTA	25	2.603632E-4	55.019444	38
ATGTCGT	25	2.7152663E-4	54.55401	37
ATATCGT	25	2.7152663E-4	54.55401	37
GATATCG	25	2.7812461E-4	54.289593	36
ATCCGTT	40	0.006425201	53.51777	70
CCATTAT	40	0.006425201	53.51777	70
TCGACAG	20	0.0070137354	52.365944	40
GTCACTA	45	5.7611032E-8	49.42754	1
CGGGATA	35	3.654703E-5	45.45779	17
CTTGAAA	155	0.0	44.88888	57
TCGTATG	125	0.0	44.685608	40
ACTACCT	50	1.3198041E-7	44.48478	4
TCACTAC	50	1.3198041E-7	44.48478	2
GCTTGAA	165	0.0	44.215485	56
CTTATAC	180	0.0	42.366463	1
CGTATGC	150	0.0	42.21407	41