EGAF00004692096 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004692096
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	664705
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	1210	0.18203563987031843	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1143	0.17195598047254043	No Hit
GTATTATAGTTCCTGGACGTTCGGCCAAGGGACCAAGGTGGAAATCAAACGAACTGTGGCTGCACCATCTGTCTT	957	0.1439736424428882	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	821	0.12351343829217472	No Hit
CTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCT	804	0.12095591277333553	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	752	0.11313289353923921	No Hit
GAGTACGGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACAT	727	0.10937182659976982	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	674	0.10139836468809472	No Hit
GTATCAACGCAGAGTACGGGTGACCACGGGTGACGGGGAATCAGGGTTCG	672	0.10109747933293715	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGCGT	30	0.003188692	63.91553	70
GTGGTAT	340	0.0	57.846203	1
TGGTATC	355	0.0	53.4634	2
GGTATCA	1225	0.0	44.29041	1
GTATCAA	3585	0.0	42.091717	1
CGACATG	80	7.844449E-5	39.94721	70
ATACGTA	35	0.001473727	38.716198	11
TCGACAT	50	0.0027358488	34.130276	69
TATCAAC	4455	0.0	33.93001	2
AACGCAG	4550	0.0	33.211582	6
ATCAACG	4580	0.0	32.91511	3
TCAACGC	4595	0.0	32.7364	4
CAACGCA	4680	0.0	32.144245	5
ACGCAGA	4775	0.0	31.575684	7
CGCAGAG	4810	0.0	31.34592	8
GACCGGA	125	2.9900326E-5	30.679455	70
GCAGAGT	4945	0.0	30.419363	9
AGAGTAC	4975	0.0	30.165564	11
CAGAGTA	5015	0.0	29.992508	10
CGGTACC	210	0.0	28.233374	45