EGAF00004692173 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004692173
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	187440
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAGGCAGAAATCTCGTATGCCGT	762	0.4065300896286812	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	351	0.18725992317541615	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	219	0.11683738796414853	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	216	0.11523687580025609	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	205	0.10936833119931712	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	201	0.10723431498079386	No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGC	198	0.10563380281690139	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	196	0.10456679470763977	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	155	0.0	73.04882	70
GTATTGA	15	0.0032916071	63.393482	1
TTTCGGT	20	0.009052378	49.09151	30
CGTATGC	160	0.0	48.734924	41
GTATGCC	170	0.0	46.324493	42
TCGTATG	170	0.0	45.568905	40
GCCGTCT	180	0.0	44.584267	46
TCGTGGA	35	7.53872E-4	44.345844	57
ATGCCGT	190	0.0	43.86117	44
CTTGAAA	195	0.0	43.77731	57
AAAGGGG	160	0.0	43.749447	68
TATACAC	170	0.0	42.860943	3
AGCGAGA	30	9.584812E-4	42.239773	5
ATCTCGT	155	0.0	41.775932	37
CCCACGA	185	0.0	41.120102	19
TCTCGTA	160	0.0	40.821945	38
AAAAGGG	155	0.0	40.819115	67
CACGAGA	185	0.0	39.43835	21
AGAAATC	170	0.0	39.205563	33
TACACAT	195	0.0	38.99056	5