FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004692174

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004692174
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences187440
Sequences flagged as poor quality0
Sequence length20-76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14320.7639778062313274No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2640.14084507042253522No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT2400.12804097311139565No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2320.12377294067434913No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT2260.12057191634656424No Hit
GCCTTGGGCTGACCCAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCCA1940.10349978659837814No Hit
GTCCAGGAGTGTTTGTGGCTTGTACTATAAATCAGTGACCTGGGTGCTTG1880.10029876227059326No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)