EGAF00004692413 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004692413
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1391155
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTTTATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGT	2805	0.20163101882967752	No Hit
GCTCAGTAGCAGGTGCCGTCCACCTCCGCCATGACAACAGACACATTGAC	2635	0.1894109570824243	No Hit
GTATTACTGTCAGCATTATGGTGCCTCCCCTCGAACGTTCGGCCAAGGGA	2493	0.1792036113876599	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	2486	0.1787004323745377	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	2113	0.15188817924674103	No Hit
ATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGTCCACCT	2111	0.1517444138144204	No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA	1976	0.14204024713277816	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	1963	0.1411057718226941	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	1817	0.1306108952632884	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG	1787	0.12845441377847905	No Hit
CATTGACATGGGTGGGTTTACCCGCCAAGCGGTCGATGGTCTTCTGTGTGAAGGCCAGCGGCAGGGCCTCGTGGC	1582	0.11371845696561489	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	1582	0.11371845696561489	No Hit
CAGTAGCAGGTGCCGTCCACCTCCGCCATGACAACAGACACATTGACATG	1571	0.11292774708785147	No Hit
CAGTAATACACTGCAAAATCTTCAGGCTCCAGTCTGCTGATTGTGAGAGTGAAGTCTCTCCCAGACCCACTGCCA	1548	0.11127444461616427	No Hit
GTAGCAGGTGCCGTCCACCTCCGCCATGACAACAGACACATTGACATGGG	1512	0.108686666834393	No Hit
GTACCTGACTTGGGCATCCCGGCAGGAGCCCAGCCAGGGCACCACCACCT	1481	0.1064583026334233	No Hit
GGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAG	1448	0.104086173000133	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	445	50.40828	41
TCGTATG	440	50.08989	40
CTAGCGC	715	49.68325	28
TAGCGCT	715	47.844048	29
ACTAGCG	735	47.831345	27
GCCGTCT	415	47.09657	46
GGTATCA	2210	44.399	1
GACTAGC	785	44.314217	26
CCCACGA	800	43.84078	19
ACGAGAC	800	43.43016	22
ATCTCCG	820	43.17189	10
GCGCTCA	725	43.0698	31
ATCTCGT	400	42.80244	37
CGCTCAT	660	42.7389	32
AGACTAG	815	42.664585	25
CGAGACT	845	41.124706	23
TTATACA	895	41.06391	2
ATGCCGT	525	41.03429	44
TCTCCGA	880	40.99313	11
CCGTCTT	490	40.67435	47