FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004692432

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004692432
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465463
Sequences flagged as poor quality0
Sequence length20-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTAGCACTGTCTTCATCACAGATATTGCTCTGGGTAGCAGTAACTATC11420.2453471059998324No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10750.23095283620824855No Hit
GGGTAGCAGTAACTATCTGATTATCCAGCTCCACTTCTGTAGGATCACAT8610.18497710881423443No Hit
GTATATTACTGTCAGAGGTTTAGTGACCCAATGGCCATTTTTGGCCCGGGGACCAGGCTGGAGATCAAGCGAA7430.15962600679323596No Hit
GGATAGCAGGCATCTGGGGTTAAGGCTGTTTCCACCATTTTGGTCTCACCACCATATACGAGTGGGACCACAG7020.1508175730401772No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT6590.14157945959184726No Hit
GTAATATACTGCAGAATCTTCGGGCTCAACTCTGGTGATGGTGAGAGTGAAGTCTGTTCCGGACACACTGCCA6510.1398607408107626No Hit
GTGCTAGAGAATACGTACCATGAAATACATATATTTCATAAGGTTCAGTT6440.13835686187731355No Hit
GTGCTACAGAGACCTGCTACACTTATGACAGAAACAAGTGCTACACAGCT5620.120739994371196No Hit
CCATATACGAGTGGGACCACAGCTGTGTAGCACTTGTTTCTGTCATAAGT5620.120739994371196No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC5080.10913864259887467No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC4970.10677540427488329No Hit
ATGTAAGTGTGCCCGGATTACTTCCAGGATCATCCGTTCTTCCGAAGATCCTAATGAGGACATTGTGGAGAGAAA4900.10527152534143423No Hit
GTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCCGGCTCCCAGAGGTCA4810.103337966712714No Hit
TCTCTACACAGTGAAACTTTTTTTAAAAAGAATAGTAAAGAAAATGCGGA4700.10097472838872262No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)