FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004692601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004692601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4971
Sequences flagged as poor quality0
Sequence length22-76
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGT4729.495071414202373No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGTATGCCGT991.9915509957754978No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCC851.7099175216254276No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGG641.2874673104003218No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGGCGT470.9454838060752363No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGTATGCCGG410.8247837457252062No Hit
TCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCG360.724200362100181No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAAT280.5632669483001408No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTTTGCCGT250.5029169181251257No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGTATGGCGT240.48280024140012073No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGGATGCCGT220.4425668879501106No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGGTTGGCGG220.4425668879501106No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTTTGGCGT210.4224502112251056No Hit
GAGACAGCTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTC200.40233353450010056No Hit
GTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACGCTCATGAA200.40233353450010056No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGGCGG170.3419835043250855No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGTATGGCGG150.30175015087507545No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGGATGGCGT150.30175015087507545No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGGATGCCGG140.2816334741500704No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAA140.2816334741500704No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATATCGTATGCCGT140.2816334741500704No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATTCCGT130.2615167974250654No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGGATGGCGG120.24140012070006037No Hit
ATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGTCTT120.24140012070006037TruSeq Adapter, Index 8 (95% over 22bp)
CTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGGC120.24140012070006037No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTGGTATGCCGT120.24140012070006037No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATGTCGTATGCCGT120.24140012070006037No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGTTTGGCGT120.24140012070006037No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGTTTGCCGT120.24140012070006037No Hit
AGAGACAGCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCG120.24140012070006037No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGGTTTGCGG120.24140012070006037No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGGATGCCGT110.2212834439750553No Hit
TCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGTATGCCG100.20116676725005028No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATTCCGG100.20116676725005028No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTGGTATGCCGG100.20116676725005028No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTTTGCCGG100.20116676725005028No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGGTTGGCGG100.20116676725005028No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGTTTGGCGG100.20116676725005028No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGGATGCCGG100.20116676725005028No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGA100.20116676725005028No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGTATGCC100.20116676725005028No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTTTGCC90.18105009052504525No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGGATGGCGG90.18105009052504525No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGTATGGCGG90.18105009052504525No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATTGCGT90.18105009052504525No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGGTTTGCGG90.18105009052504525No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGGGTGGGGG90.18105009052504525No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGTTTTGCGG90.18105009052504525No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAAT90.18105009052504525No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTGGTTTGGCGG80.16093341380004023No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGGTTGGCGG80.16093341380004023No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGGTTGCCGT80.16093341380004023No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGGATGGCGT80.16093341380004023No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGGATGGCGG80.16093341380004023No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGTATTCCGG70.1408167370750352No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGGGTGGCGG70.1408167370750352No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTGGGATGGCGG70.1408167370750352No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTGGTATGGCGG70.1408167370750352No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTGGGTTGGCGG70.1408167370750352No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGTATGCCGT60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTGGTTTGGCGT60.12070006035003018No Hit
GAGACAGCTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGG60.12070006035003018No Hit
GAGACAGCTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGC60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTTTGGCGG60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGTTTGGCGG60.12070006035003018No Hit
TCTTATACACATCTCCGAGCCCACGAGACGCTCATGAAT60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGGTTGCCGG60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGGTTGCCGT60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGGTTGCCGG60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCGGTTTCCGG60.12070006035003018No Hit
AGAGACAGCTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCT60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGTGTGGCGG60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGGGTTGCGG60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGGTTGGCGT60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAAGCTCGTATGCCGT60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTGGTATGGCGT60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTGGGATGCCGG60.12070006035003018No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCTCATGA60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGGTTTGGGG60.12070006035003018No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGTATGCCGG50.10058338362502514No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATTCC50.10058338362502514No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGTTTGGCGT50.10058338362502514No Hit
TCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGTATGGCG50.10058338362502514No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTTTTGCGG50.10058338362502514No Hit
CATTGGAGGATTTGCTAGCGCTACCAG50.10058338362502514No Hit
CACTGGTAGCGCTAGCAAATCCTCCAATGA50.10058338362502514No Hit
GAGACAGTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCG50.10058338362502514No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATTGCGG50.10058338362502514No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGGGTATGGCGT50.10058338362502514No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATATCGTATGCC50.10058338362502514No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCTCATGAA50.10058338362502514No Hit
TCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTTTGGCG50.10058338362502514No Hit
AGAGACAGCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCGCG50.10058338362502514No Hit
TCTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGGCG50.10058338362502514No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)