EGAF00004692728 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004692728
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25532
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGC	57	0.22324925583581387	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	50	0.19583268055773148	No Hit
GCCTTGGGCTGACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCTG	47	0.1840827197242676	No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGG	40	0.15666614444618518	No Hit
TCTCTGGACTGAAGACTGAGGACGAGGCTGACTACTACTGTCAGTCTTAT	39	0.15274949083503053	No Hit
GCCCCACTCTGTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAG	39	0.15274949083503053	No Hit
GACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCTGATTGTTGCTATCATAAGACTGACAGTAGTAGTCAG	38	0.1488328372238759	No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGG	37	0.1449161836127213	No Hit
CCTCAGAGGAGGGTGGGAACAGAGTGACCGAGGGGGCAGCCTTGGGC	34	0.1331662227792574	No Hit
GTGTCGGAGTCTCCGGGGAAGACGGTAACCATCTCCTGCACCCGCAGCAGTGGCAGCATTGCCAGCAACTATGTG	34	0.1331662227792574	No Hit
CACCAGTGTGGCCTTGTTGGCTTGAAGCTCCTCAGAGGAGGGTGGGAACAGAGTGACCGAGGGGGCAGCCTTGGG	33	0.1292495691681028	No Hit
GTCCAGAGATGGTGAGGGAGGCAGAGTTGGAGGAGCTGTCGATGGAGCCA	32	0.12533291555694814	No Hit
GAGTGGGGCTGAGTCAGCATAAAATTGGCCCAAGAACCTGTGCAGTGAGCGAGGAGGGTGAGAAGTAGTGGAGCC	31	0.12141626194579352	No Hit
CTACTACTGTCAGTCTTATGATAGCAACAATCAGGTGTTCGGCGGAGGGACCAAGCTGACCGTCCTAGGTCAGCC	29	0.11358295472348426	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTGGTG	60	0.0016130987	53.303032	70
CACTGGT	70	0.004138698	42.772034	69
AAGGCCA	80	0.0030727526	33.03286	62
GGCCACA	85	0.0032602223	32.62127	64
CCACACT	75	0.006688596	29.782011	66
TGGTGTG	50	4.5847258E-4	29.439331	34
CTGGTGT	50	4.8742918E-4	29.134577	33
ACAAGGC	65	0.0030941246	27.061539	60
GCCACAC	80	0.0099281175	26.7868	65
CAAGGCC	70	0.0047534206	26.451128	61
AACAAGG	65	0.0030941246	26.188585	59
GGTGTGT	60	0.0012664029	24.739803	35
CCAACAA	70	0.0047534206	23.285162	57
AGCCAAC	70	0.0047534206	21.772047	55
AAGCCAA	70	0.0047534206	21.31045	54
GCCAACA	75	0.007081867	20.847408	56
CCACCCT	70	0.003948937	20.347021	32
CCAAGGC	85	6.298279E-4	19.476816	3
CTCTGAG	75	0.007081867	18.394772	2
AGCTTCA	75	0.007081867	18.394772	10