EGAF00004692885 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004692885
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	759145
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1452	0.19126780786279302	No Hit
CTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGT	1325	0.1745384610318187	No Hit
GCTCAGTAGCAGGTGCCGTCCACCTCCGCCATGACAACAGACACATTGAC	1302	0.17150873680258713	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	1261	0.16610792404613084	No Hit
GAGTTTATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGT	1257	0.16558101548452536	No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA	1252	0.16492237978251847	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAG	1133	0.14924685007475516	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	1104	0.14542676300311536	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	1089	0.14345085589709475	No Hit
ATTCAGGGGTGGGGACAGGCGGGCGGCTCAGTAGCAGGTGCCGTCCACCT	999	0.13159541326097124	No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCC	856	0.11275843218357495	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	853	0.11236325076237083	No Hit
CCTATATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTC	848	0.11170461506036396	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	834	0.10986043509474475	No Hit
GGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAG	832	0.109596980813942	No Hit
GTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATT	825	0.1086748908311324	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGTAT	30	9.352632E-6	57.258877	39
CTAACGC	155	0.0	55.03919	3
CCTAACG	150	0.0	54.686375	2
TCGCAAG	20	0.008906694	49.30869	23
GCGTATG	50	6.9321686E-8	48.30737	40
CGTATGC	295	0.0	44.62987	41
ATGCCGT	280	0.0	43.894836	44
GCCGTCT	275	0.0	43.802002	46
CCGTCTT	290	0.0	42.92597	47
TCGTATG	280	0.0	41.89925	40
CGAGACA	435	0.0	39.295815	23
TATCGTA	35	0.0014085729	39.074566	38
TCTCCGA	420	0.0	39.05655	11
AATCTCG	330	0.0	39.032986	36
ATATCGT	35	0.0014431246	38.882397	37
ACGAGAC	445	0.0	38.38743	22
CGTCTTC	330	0.0	37.893288	48
GGCAATC	365	0.0	37.716805	33
ATCTCGT	320	0.0	37.21167	37
ATCTCCG	450	0.0	37.181835	10