Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004693199 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 65393783 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGCCG | 3545 | 0.0 | 17.126007 | 48 |
GCGGGTT | 9695 | 0.0 | 13.586727 | 1 |
CGTATCG | 4370 | 0.0 | 13.503524 | 3 |
CGGGTAT | 4795 | 0.0 | 13.119384 | 1 |
CCCGTAT | 6725 | 0.0 | 12.816896 | 1 |
GTATCGA | 4660 | 0.0 | 12.366961 | 4 |
CGGGCTA | 4500 | 0.0 | 12.357509 | 1 |
CGGGGAT | 11585 | 0.0 | 12.180173 | 1 |
TCGTATG | 5010 | 0.0 | 12.118103 | 45 |
CGGGGTT | 19590 | 0.0 | 11.922253 | 1 |
TACTCTA | 11085 | 0.0 | 11.518565 | 4 |
TACCGCG | 7125 | 0.0 | 11.328977 | 13 |
GCCGTTA | 7160 | 0.0 | 11.22542 | 20 |
CCGTTAA | 7415 | 0.0 | 10.8398695 | 21 |
CTAGTTG | 11680 | 0.0 | 10.750242 | 8 |
CCGTATC | 6655 | 0.0 | 10.682751 | 2 |
CGTATGC | 6040 | 0.0 | 10.679831 | 46 |
CGGGTGT | 17180 | 0.0 | 10.600628 | 1 |
CGGGTTA | 3855 | 0.0 | 10.458203 | 1 |
CGGGCAT | 13850 | 0.0 | 10.389008 | 1 |