FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004693255

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004693255
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60979719
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGCTTCCAATCTCGTAT16325212.6771540223069903TruSeq Adapter, Index 11 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGCTTCCAATCGCGTAT2246910.3684684083244136TruSeq Adapter, Index 11 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGCTTCCAATCTCGGAT1768850.29007185159380616TruSeq Adapter, Index 11 (97% over 37bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGCTTCCAATCTCGTTT1294140.21222465784074868TruSeq Adapter, Index 11 (97% over 37bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)