FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004693256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004693256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60979719
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9558271.567450646992978No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG798000.13086318092085664No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)