Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004693333 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 36200298 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGAACTGATCTCGTAT | 496842 | 1.372480414387749 | TruSeq Adapter, Index 7 (97% over 37bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGAACTGATCGCGTAT | 149423 | 0.4127673203132195 | TruSeq Adapter, Index 7 (97% over 37bp) |
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 83730 | 0.23129643849893172 | No Hit |
GGCTGAGATGCTTTTAAATGTGATGTTATAAGCCTAAGGCAGCTTGACTT | 40705 | 0.1124438257386721 | No Hit |