FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004717537

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004717537
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72
Sequences flagged as poor quality0
Sequence length33-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCC22.7777777777777777No Hit
CTGGAGAAATAGTGATGACGAAGGCTCCAGCCACCCTGTCTGTGTCACCAGGGGAAAGAGACACACTCTACTGC11.3888888888888888No Hit
GCTCTTAGGTTCAGAAGCGACCCTCACGTGCCCACTGCCCGGCCTGAGAG11.3888888888888888No Hit
ATGGTGCATCCACCAGGGCCACTGGTATCCCAGCCAGGTTCAGTGGCAGT11.3888888888888888No Hit
AGACAGGTAAACCCACCCATGTCAATGTGTCTTTTGACATTGCGGAGGTGGACGGCACCTG11.3888888888888888No Hit
GTATCAACGCAGAGTACGGGGGAACTGCTCAGTTAGGACCCAGACGGAAC11.3888888888888888No Hit
ATCATACTAAAAAATTAACAAAGAAAACTAAAATAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA11.3888888888888888No Hit
AGGTGGAACAGTTATCTCCAGAAGAAGAAGAGAAAAGGAGAATCCGAAGGGAAAGGAATAAGATGGCTGCAGCC11.3888888888888888No Hit
GTGTACAGGTCCCCGGAGGCATCCTGGCTGGGTGGGAAGTTTCTGGCGGT11.3888888888888888No Hit
CCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAGAGGG11.3888888888888888No Hit
CTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTAC11.3888888888888888No Hit
ATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTCTTTCTGCAAATGAAC11.3888888888888888No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAGCTATTTGTGACGGGCG11.3888888888888888No Hit
GTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTAAGAGCATTAGCAG11.3888888888888888No Hit
ATGTTGCCCAGGCTGGAGTCCAGTGGCTATTCACAGGCGCGATCCCACTA11.3888888888888888No Hit
GTCTGGTTACAGCTCAGTTCGTCGCTCTATTTTGAGCAGCTCCACCTCGA11.3888888888888888No Hit
GGCTCAGCGGGAAGACCTTGGGGCTGGTCGGGGATGCTGAGGAGACGGTG11.3888888888888888No Hit
ATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTCTT11.3888888888888888No Hit
GCCAATGCTCCAGCTGTCGTCTGACTCTGGGTTCGTTGGGGACATGAGAT11.3888888888888888No Hit
CACAGTGCCCAGACGGCAAGTCCGTGACATGCCGCGTGAAGCACTACACG11.3888888888888888No Hit
CTCCTACTTACAGGACTAAACATAATAGTCACAGCCCAATACTCCCTCTACATATTTAAAACAACACAATTGGGC11.3888888888888888No Hit
CGTCCAGGTGAAGGTGGCACCAGAGGCATCTCTCAGGCCGGTCAGTGTGCACGTGAGGTTCGCTTCTGAACCT11.3888888888888888No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCG11.3888888888888888No Hit
CTCGAGGACCTGCTCTTAGGTTCAGAAGCGAACCTCACGTGCACACTGACCGGCCTGAGAGATGCCTCAGGTGTC11.3888888888888888No Hit
ATTCAGCAGGAACACAACAGAGGAAGTTCCAGATTTCACCTGCTCATCAT11.3888888888888888No Hit
CCCTTGGCCCCAGACTAATCCCAAAGTGGGACTGCTTACTCTTGCACAGT11.3888888888888888No Hit
ATCCTACAGAAGTGGAGCTGGATAATCAGATAGTTACTGCTACCCAGAGC11.3888888888888888No Hit
ACCAGCTCGTTCAGGGCCAGCTCCTCCGACGGCGGCGGCAGCAGGTGGAC11.3888888888888888No Hit
CCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGA11.3888888888888888No Hit
GGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGC11.3888888888888888No Hit
AAATATCTCTGATCCCACCTCACCATTGAGAACCAGATTTGTGTACCATT11.3888888888888888No Hit
AAAGAATCAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGCGAGAAGACCATTAGCCCACAAACC11.3888888888888888No Hit
GTCTGGGACAGAGTTCACTCTGACCATCAGCAGCCTGCAGCTTGAAGATT11.3888888888888888No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCCTCATGGTGCTGCTGAGGCTCTAGGTTCTGTCCTT11.3888888888888888No Hit
GCAGTGACCAGCCTTCACAATAAAGAAGGAAAGAAGTTTGTTGGAAGGATTACCCAGTGAGAGCTAGAACTTCC11.3888888888888888No Hit
CTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGT11.3888888888888888No Hit
GGTGAAGGTGGCACCAGAGGTATCTCTCAGGCCGGTCAGTGTGCACGTGAGGTTCGCTTCTGAACCTAAGAGC11.3888888888888888No Hit
ACCTAATAAAGATAACAATGTGACTATTTTAATTATTTTGCTGGCAGGTAGTTGGTTTTACATCACCCAAAAAA11.3888888888888888No Hit
GTTATCCAGAATGTAAGAAAACAAAATATAAAACAAAATCTGAACTCTCAAAAGTCTATTTTTTTAACTGAAAAT11.3888888888888888No Hit
GACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGCTGCTGA11.3888888888888888No Hit
GACTTAGAGTGGGGCCTCTACATAGACTCAGGATGGGGCTGGTCACCAGA11.3888888888888888No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.3888888888888888No Hit
CCAAAGATCAGGAGCTTAGGGGCTTTCCCTGGTTTCTGCTGATACCAATTTAAATAGATGCTAATGATCTGACTT11.3888888888888888No Hit
CTTTGGTCGCTCGCTCCTCTCCTACTTGCATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGAC11.3888888888888888No Hit
CACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGAAAAGTCCAAGCACCAGTTATCCCTG11.3888888888888888No Hit
GTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAACTTA11.3888888888888888No Hit
CAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAGCTCTTTG11.3888888888888888No Hit
GCCTATCCACTTGGTGATCAGCACTCAGCACCGACGATTCACCATCGAAC11.3888888888888888No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGG11.3888888888888888No Hit
GGATGTGACTGTGCCCTGCCCAGTTACCTCAGCTCCACCTACCCCATCTCCCTCAACTCCCCCTACCCCATC11.3888888888888888No Hit
CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGGTG11.3888888888888888No Hit
AAGCAGAGTACAGTAATAAGTAAAAAAAAACAAATAAAGAATAATGCACAAACAGACAGATAAAAAGCACCTAT11.3888888888888888No Hit
GCCTATCCACTTGGTGATCAGCACTGAGCACCGAGGATTCACCATCGAAC11.3888888888888888No Hit
TGCTGCTCTGGCTCCCAGGTGCCAAATGTGACATCCAGATGACCCGGTCT11.3888888888888888No Hit
TGTTACAGGAGTGCAGCAATTTAGAGAGTGTATCAGGATTGTGGCTCACTGGCAGCTGCAGCTATGTTAGTGCTT11.3888888888888888No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.3888888888888888No Hit
CTGTAGCAGCCACAGAGGTCACGCTCAGGTGGTCCTTGAACAGCGCTCTT11.3888888888888888No Hit
CTCCAAGGCAAAGTCAAAAAAAAAAAAAAAACGCTGGGGGGAATCCGAGTGACATTTAAAAACACTGACTCATAT11.3888888888888888No Hit
ATCCTACCACTCCCAAATAATCTTTCCATTTTCTTCTGCGTTTAGTAAATGCGTTAACTAGGCTTTAAATGACGC11.3888888888888888No Hit
CTCTTGGGGGTCTCACTGCACGGCTTGTTCATTGGCAATGCTTCCCGAGTACTGGGGCTTCATCACAT11.3888888888888888No Hit
GTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAACTGACTTATAACCTG11.3888888888888888No Hit
AACCTGCGAGGTGAGGACACGGCTGTGTATTACTGTGCGAGAGACGCGGC11.3888888888888888No Hit
CTGCTTCACAAACTCAAAGGCCTCGTCCAGCTTGACTCGATTAGTCCTCA11.3888888888888888No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.3888888888888888No Hit
CATTTATGTCTTCGGACCTGGGACCAGGGTCACCGTCCTAGGTCAGCCCA11.3888888888888888No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTC11.3888888888888888No Hit
CAGCGCCTTACCTGAGAGCCACGTACCGTTACACCCCGCTGCTGGGTTGGCTCCTCACTCCCAACATCTACCTC11.3888888888888888No Hit
ATCTCCACCTTGGTCCCTCCGCCGAAAGTGAGAGGCCAGTTGCTACGCTG11.3888888888888888No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGGGGGGGATGGTTGGGTTT11.3888888888888888No Hit
CATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGTGAATGGCTCATTA11.3888888888888888No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.3888888888888888No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)