EGAF00004720061 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720061
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21701810
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTCG	13990	0.0	9.39251	94-95
GCGTCGT	12145	0.0	9.156354	94-95
GAGCGTC	17515	0.0	9.0623455	94-95
CGTCGTG	11570	0.0	9.056898	94-95
CGTGTAG	9605	0.0	8.609068	94-95
GATCGGA	35655	0.0	8.596932	94-95
ATCGGAA	33190	0.0	8.533816	94-95
AGAGCGT	19480	0.0	8.45315	94-95
GTCGTGT	10860	0.0	8.161186	94-95
TCGTGTA	9520	0.0	7.9870663	94-95
AGATCGG	40210	0.0	7.8949003	94-95
TCGGAAG	33010	0.0	7.860522	94-95
AAGAGCG	22935	0.0	7.7702823	94-95
TAGATCG	12790	0.0	7.7099547	94-95
CGGAAGA	33410	0.0	7.2258925	94-95
CAGATCG	14310	0.0	6.2268143	94-95
GTGTAGG	13580	0.0	5.949129	94-95
AAGATCG	14050	0.0	5.682471	94-95
GAGATCG	16565	0.0	5.565633	94-95