EGAF00004720070 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720070
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21293085
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGGAA	32695	0.0	8.612068	94-95
GATCGGA	34900	0.0	8.503324	94-95
TAGATCG	11990	0.0	8.415382	94-95
TCGGAAG	32550	0.0	8.329506	94-95
AGATCGG	39420	0.0	8.178756	94-95
CGTCTGA	9340	0.0	7.7781916	94-95
CACACGT	15220	0.0	7.690178	94-95
CGGAAGA	33200	0.0	7.4942346	94-95
ACACGTC	11885	0.0	7.3311315	94-95
GCACACG	17990	0.0	6.928389	94-95
ACGTCTG	11485	0.0	6.7802696	94-95
AAGATCG	13205	0.0	6.562338	94-95
CACGTCT	13290	0.0	6.055902	94-95
CAGATCG	14480	0.0	5.7877564	94-95
GAGATCG	16900	0.0	5.703526	94-95
AGAGCAC	29960	0.0	5.5945735	94-95
AGCACAC	26275	0.0	5.2407007	94-95
GAGCACA	30735	0.0	5.0904517	94-95
GAAGAGC	43305	0.0	5.0547185	94-95