EGAF00004720155 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720155
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20763694
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTCG	13270	0.0	9.65126	94-95
GTCGTGT	9980	0.0	9.309201	94-95
CGTCGTG	10770	0.0	9.244099	94-95
TCGTGTA	8930	0.0	9.206422	94-95
GCGTCGT	11515	0.0	9.182529	94-95
ATCGGAA	31755	0.0	9.0016	94-95
GATCGGA	34330	0.0	8.921653	94-95
AGATCGG	39265	0.0	8.520465	94-95
TAGATCG	11570	0.0	8.4611635	94-95
GAGCGTC	16555	0.0	8.439454	94-95
AGAGCGT	18235	0.0	8.196173	94-95
CGTGTAG	8575	0.0	8.118947	94-95
TCGGAAG	32235	0.0	8.07147	94-95
AAGAGCG	21655	0.0	7.8892727	94-95
CGGAAGA	32040	0.0	7.5198927	94-95
AAGATCG	13760	0.0	6.5101223	94-95
CAGATCG	14760	0.0	6.0368605	94-95
GAGATCG	16800	0.0	5.275526	94-95