EGAF00004720185 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720185
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21331727
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTCG	11265	0.0	9.3426695	94-95
TCGTGTA	7845	0.0	8.963903	94-95
ATCGGAA	27670	0.0	8.903649	94-95
GCGTCGT	9935	0.0	8.728174	94-95
GATCGGA	29680	0.0	8.628858	94-95
CGTCGTG	9400	0.0	8.542545	94-95
GAGCGTC	14665	0.0	8.488827	94-95
AGATCGG	33790	0.0	8.479252	94-95
TAGATCG	10880	0.0	8.253941	94-95
AGAGCGT	16535	0.0	8.175353	94-95
AAGAGCG	19195	0.0	8.1439705	94-95
GTCGTGT	8870	0.0	8.1155405	94-95
TCGGAAG	27955	0.0	8.099009	94-95
CGTGTAG	8020	0.0	7.613024	94-95
CGGAAGA	28375	0.0	7.2339635	94-95
AAGATCG	11990	0.0	6.5189123	94-95
CAGATCG	13245	0.0	5.990912	94-95
GAGATCG	14015	0.0	5.6617646	94-95