EGAF00004720325 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720325
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21885192
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTCGT	9085	0.0	9.493549	94-95
AGCGTCG	10235	0.0	9.21615	94-95
ATCGGAA	25490	0.0	8.743392	94-95
GATCGGA	27175	0.0	8.717111	94-95
TCGTGTA	7325	0.0	8.433594	94-95
CGTCGTG	8450	0.0	8.407394	94-95
AGATCGG	31010	0.0	8.275018	94-95
TAGATCG	10150	0.0	8.099477	94-95
TCGGAAG	26015	0.0	8.064618	94-95
AAGAGCG	17595	0.0	7.8457375	94-95
GTCGTGT	7965	0.0	7.815602	94-95
CGGAAGA	26700	0.0	7.492862	94-95
GAGCGTC	13395	0.0	7.4144764	94-95
AGAGCGT	14880	0.0	7.313235	94-95
CGTGTAG	7505	0.0	6.743352	94-95
CAGATCG	11980	0.0	6.148254	94-95
AAGATCG	11370	0.0	6.1228566	94-95