EGAF00004720536 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720536
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22660643
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGGAA	36935	0.0	8.851064	94-95
GATCGGA	39810	0.0	8.611418	94-95
ACACGTC	13620	0.0	8.47147	94-95
TCGGAAG	36545	0.0	8.354349	94-95
AGATCGG	44805	0.0	8.250149	94-95
TAGATCG	13700	0.0	7.7981496	94-95
CGGAAGA	36650	0.0	7.630815	94-95
CACGTCT	14155	0.0	7.2959023	94-95
CGTCTGA	10220	0.0	7.0851426	94-95
CACACGT	16910	0.0	7.0619397	94-95
CAGATCG	15845	0.0	6.622617	94-95
ACGTCTG	12475	0.0	6.508564	94-95
GCACACG	19705	0.0	6.481947	94-95
AAGATCG	14785	0.0	6.26243	94-95
GAGATCG	18860	0.0	5.853436	94-95
AGAGCAC	33090	0.0	5.668001	94-95
AGCACAC	28975	0.0	5.325857	94-95
GAAGAGC	47235	0.0	5.096519	94-95
GAGCACA	33850	0.0	5.0708323	94-95