EGAF00004720551 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720551
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22974281
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTCG	14900	0.0	9.7612095	94-95
GCGTCGT	13200	0.0	9.506013	94-95
CGTCGTG	12005	0.0	8.967565	94-95
ATCGGAA	36350	0.0	8.891457	94-95
GATCGGA	39360	0.0	8.875661	94-95
TAGATCG	13655	0.0	8.806377	94-95
TCGTGTA	10015	0.0	8.779892	94-95
AGATCGG	44855	0.0	8.487701	94-95
GTCGTGT	11285	0.0	8.48676	94-95
TCGGAAG	35920	0.0	8.455377	94-95
GAGCGTC	18745	0.0	8.177352	94-95
AGAGCGT	20745	0.0	8.156522	94-95
CGGAAGA	35665	0.0	7.902799	94-95
AAGAGCG	24340	0.0	7.8012586	94-95
CGTGTAG	9975	0.0	7.7429934	94-95
CAGATCG	16150	0.0	6.430539	94-95
AAGATCG	15460	0.0	6.3024993	94-95
GAGATCG	18615	0.0	5.553473	94-95
GTGTAGG	14095	0.0	5.412257	94-95