Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004720650 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22387358 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATCGGAA | 36270 | 0.0 | 8.870444 | 94-95 |
GATCGGA | 39455 | 0.0 | 8.768213 | 94-95 |
TCGGAAG | 36220 | 0.0 | 8.338583 | 94-95 |
TAGATCG | 13955 | 0.0 | 8.201076 | 94-95 |
AGATCGG | 44625 | 0.0 | 8.135474 | 94-95 |
ACACGTC | 13140 | 0.0 | 7.986942 | 94-95 |
CGGAAGA | 36180 | 0.0 | 7.5340233 | 94-95 |
CGTCTGA | 9745 | 0.0 | 7.4557824 | 94-95 |
ACGTCTG | 12240 | 0.0 | 7.196911 | 94-95 |
CACGTCT | 14025 | 0.0 | 7.127428 | 94-95 |
CACACGT | 16835 | 0.0 | 6.8263083 | 94-95 |
GCACACG | 19430 | 0.0 | 6.6967077 | 94-95 |
AAGATCG | 14640 | 0.0 | 6.584739 | 94-95 |
CAGATCG | 15880 | 0.0 | 6.115422 | 94-95 |
AGAGCAC | 32900 | 0.0 | 5.997341 | 94-95 |
GAGATCG | 18815 | 0.0 | 5.7799177 | 92-93 |
AGCACAC | 28165 | 0.0 | 5.580869 | 94-95 |
GAGCACA | 33375 | 0.0 | 5.3286123 | 94-95 |
AAGAGCA | 42495 | 0.0 | 5.134892 | 94-95 |