EGAF00004720680 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720680
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23798099
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	32635	0.0	8.897394	94-95
ATCGGAA	30220	0.0	8.555657	94-95
AGATCGG	36655	0.0	8.329668	94-95
TCGGAAG	30145	0.0	7.7735934	94-95
TAGATCG	11655	0.0	7.740897	94-95
ACACGTC	11420	0.0	7.6922884	94-95
CGTCTGA	8645	0.0	7.442593	94-95
CGGAAGA	31060	0.0	7.0706654	94-95
CACGTCT	13190	0.0	6.7320414	94-95
ACGTCTG	11155	0.0	6.704416	94-95
CACACGT	14780	0.0	6.6343074	94-95
GCACACG	17480	0.0	6.5603294	94-95
AAGATCG	13635	0.0	6.3207912	94-95
GAGATCG	15685	0.0	6.0547395	94-95
CAGATCG	13665	0.0	5.7856817	94-95
AGAGCAC	30035	0.0	5.2962337	94-95