EGAF00004720714 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720714
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21159701
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGGAA	32625	0.0	9.485891	94-95
GATCGGA	35400	0.0	9.245496	94-95
TCGGAAG	32025	0.0	9.188962	94-95
AGATCGG	39785	0.0	8.632432	94-95
ACACGTC	11400	0.0	8.062883	94-95
CGGAAGA	31880	0.0	7.9567766	94-95
TAGATCG	12585	0.0	7.907607	94-95
CGTCTGA	8895	0.0	7.4764657	94-95
AAGATCG	14025	0.0	7.315856	94-95
ACGTCTG	10990	0.0	7.1750455	94-95
CACACGT	14720	0.0	7.051116	94-95
GCACACG	16750	0.0	7.04735	94-95
CACGTCT	12570	0.0	7.0100784	94-95
CAGATCG	13695	0.0	6.486252	94-95
GAGATCG	16720	0.0	6.150861	94-95
AGAGCAC	29420	0.0	5.699625	94-95
AGCACAC	25420	0.0	5.634119	94-95
GAGCACA	30145	0.0	5.278904	94-95
AAGAGCA	39540	0.0	5.057777	94-95