EGAF00004720715 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720715
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21159701
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTCG	12845	0.0	10.076061	94-95
GCGTCGT	11000	0.0	9.434463	94-95
ATCGGAA	31810	0.0	9.414122	94-95
TCGTGTA	8475	0.0	9.303081	94-95
CGTCGTG	10430	0.0	9.266986	94-95
GTCGTGT	9690	0.0	9.116907	94-95
GATCGGA	34830	0.0	9.109224	94-95
TCGGAAG	30990	0.0	8.981201	94-95
CGTGTAG	8480	0.0	8.877523	94-95
GAGCGTC	16420	0.0	8.6922	94-95
AGATCGG	38995	0.0	8.593033	94-95
TAGATCG	11940	0.0	8.214368	94-95
AAGAGCG	21510	0.0	8.136834	94-95
AGAGCGT	18215	0.0	8.031191	94-95
CGGAAGA	31070	0.0	7.8344946	94-95
CAGATCG	14730	0.0	6.7713447	94-95
AAGATCG	14015	0.0	6.354283	94-95
GAGATCG	15215	0.0	6.321374	94-95
GTGTAGG	12505	0.0	5.6402864	94-95