EGAF00004720758 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720758
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22517308
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	33070	0.0	8.916393	94-95
AGATCGG	37610	0.0	8.717504	94-95
ATCGGAA	30590	0.0	8.498385	94-95
ACACGTC	11735	0.0	8.153118	94-95
TCGGAAG	30980	0.0	7.885618	94-95
TAGATCG	11555	0.0	7.7253766	94-95
CGGAAGA	31820	0.0	7.4760013	94-95
CACACGT	14805	0.0	7.328407	94-95
AAGATCG	13030	0.0	6.613997	94-95
CACGTCT	12625	0.0	6.5440955	94-95
CGTCTGA	8745	0.0	6.5427303	94-95
CAGATCG	14045	0.0	6.4233804	94-95
GCACACG	18055	0.0	6.390584	94-95
ACGTCTG	10885	0.0	6.3687797	94-95
GAGATCG	16465	0.0	5.9118567	94-95
AGAGCAC	29390	0.0	5.2426023	94-95
AGCACAC	26005	0.0	5.021201	94-95