EGAF00004720761 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720761
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20844752
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTCG	12470	0.0	10.614943	94-95
GCGTCGT	10675	0.0	10.017826	94-95
ATCGGAA	32520	0.0	9.434189	94-95
GATCGGA	35300	0.0	9.384625	94-95
TCGTGTA	8435	0.0	9.353665	94-95
CGTCGTG	10120	0.0	9.299156	94-95
GAGCGTC	16125	0.0	9.240525	94-95
GTCGTGT	9530	0.0	9.126769	94-95
AGATCGG	40255	0.0	9.014633	94-95
AGAGCGT	18245	0.0	8.752947	94-95
AAGAGCG	21835	0.0	8.598105	94-95
TCGGAAG	31735	0.0	8.424477	94-95
TAGATCG	12250	0.0	8.283629	94-95
CGTGTAG	8285	0.0	7.8306713	94-95
CGGAAGA	31255	0.0	7.6414437	94-95
AAGATCG	14265	0.0	7.180164	94-95
CAGATCG	14500	0.0	6.670452	94-95
GAGATCG	15825	0.0	6.1419806	94-95
GAAGAGC	41485	0.0	5.5050488	94-95