FastQCFastQC Report
Thu 16 Jun 2022
EGAF00004720963

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004720963
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456539684
Sequences flagged as poor quality0
Sequence length35-150
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN28218740.6181004847762588No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC6909970.15135529817381657No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)