EGAF00004720986 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720986
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21646852
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGATCGG	35765	0.0	8.686494	94-95
GATCGGA	31845	0.0	8.614612	94-95
ATCGGAA	29770	0.0	8.497004	94-95
TCGGAAG	29310	0.0	8.200866	94-95
TAGATCG	12005	0.0	7.795233	94-95
ACACGTC	10670	0.0	7.613015	94-95
CGGAAGA	29830	0.0	7.5642414	94-95
GCACACG	15780	0.0	7.285064	94-95
CGTCTGA	8240	0.0	7.2350492	94-95
CACACGT	13820	0.0	7.098017	94-95
ACGTCTG	9905	0.0	6.7622256	94-95
CACGTCT	11480	0.0	6.7034464	94-95
AAGATCG	12590	0.0	6.60294	94-95
GAGATCG	13670	0.0	6.30715	94-95
CAGATCG	13150	0.0	6.195315	94-95
AGAGCAC	28155	0.0	5.4834366	94-95
AGCACAC	24275	0.0	5.2444572	94-95