EGAF00004720993 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004720993
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20005643
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTCGT	10020	0.0	10.05463	94-95
AGCGTCG	11590	0.0	9.738188	94-95
CGTCGTG	9435	0.0	9.343293	94-95
TCGTGTA	7760	0.0	9.124783	94-95
GTCGTGT	8670	0.0	8.879611	94-95
GAGCGTC	14840	0.0	8.678274	94-95
ATCGGAA	28020	0.0	8.403757	94-95
AGAGCGT	16385	0.0	8.309525	94-95
TCGGAAG	27780	0.0	8.211206	94-95
CGTGTAG	7810	0.0	8.184068	94-95
GATCGGA	29725	0.0	7.945706	94-95
AGATCGG	33045	0.0	7.7010813	94-95
CGGAAGA	27935	0.0	7.6978226	94-95
AAGAGCG	19225	0.0	7.378634	94-95
TAGATCG	10415	0.0	7.1409016	94-95
AAGATCG	11865	0.0	6.848987	94-95
CAGATCG	12095	0.0	6.561582	94-95
GAGATCG	13525	0.0	5.235365	94-95
GTGTAGG	11325	0.0	5.1823497	94-95