EGAF00004721212 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004721212
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21212070
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGGAA	35675	0.0	8.74768	94-95
GATCGGA	37885	0.0	8.343962	94-95
TCGGAAG	34595	0.0	8.114573	94-95
ACACGTC	13215	0.0	7.9795303	94-95
AGATCGG	42330	0.0	7.7707515	94-95
CGTCTGA	9840	0.0	7.578723	94-95
TAGATCG	13035	0.0	7.524896	94-95
CGGAAGA	34820	0.0	7.373241	94-95
CACGTCT	13540	0.0	7.0688357	94-95
CACACGT	16475	0.0	7.0060363	94-95
ACGTCTG	12235	0.0	6.8328238	94-95
GCACACG	19205	0.0	6.7768483	94-95
AAGATCG	14505	0.0	6.287457	94-95
GAGATCG	15995	0.0	6.2808385	94-95
AGAGCAC	31305	0.0	5.947903	94-95
CAGATCG	14935	0.0	5.8997035	94-95
AGCACAC	28605	0.0	5.471482	94-95
GAGCACA	32450	0.0	5.1086035	94-95
AAGAGCA	42320	0.0	5.073227	94-95