EGAF00004721458 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004721458
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22432342
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	27765	0.0	8.861574	94-95
ATCGGAA	26055	0.0	8.7868805	94-95
AGATCGG	31440	0.0	8.482932	94-95
TCGGAAG	26170	0.0	8.42157	94-95
ACACGTC	10100	0.0	8.088833	94-95
TAGATCG	9955	0.0	7.4909544	94-95
CGGAAGA	26945	0.0	7.2979503	94-95
CACGTCT	11150	0.0	6.411216	94-95
CGTCTGA	7935	0.0	6.3750186	94-95
CACACGT	12825	0.0	6.1849737	94-95
GCACACG	14850	0.0	5.8213496	94-95
CAGATCG	11640	0.0	5.7944756	94-95
GAGATCG	13955	0.0	5.7352033	94-95
AAGATCG	11950	0.0	5.6838617	92-93
ACGTCTG	9600	0.0	5.5909553	94-95