EGAF00004721495 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004721495
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21096651
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTCG	14130	0.0	9.799513	94-95
TCGTGTA	9590	0.0	9.138731	94-95
GTCGTGT	11030	0.0	8.806957	94-95
GCGTCGT	12680	0.0	8.803527	94-95
ATCGGAA	34990	0.0	8.708851	94-95
GATCGGA	37690	0.0	8.620611	94-95
AGAGCGT	19785	0.0	8.439124	94-95
CGTCGTG	11845	0.0	8.4215555	94-95
AGATCGG	42325	0.0	8.389235	94-95
GAGCGTC	18020	0.0	8.316731	94-95
CGTGTAG	9750	0.0	8.209249	94-95
TAGATCG	12955	0.0	8.029986	94-95
AAGAGCG	23665	0.0	8.018967	94-95
TCGGAAG	34985	0.0	7.9293766	94-95
CGGAAGA	35305	0.0	7.5682316	94-95
AAGATCG	14225	0.0	6.8121786	94-95
CAGATCG	15975	0.0	6.8093033	94-95
GAGATCG	17355	0.0	6.1720586	94-95
GTGTAGG	13110	0.0	5.6523623	94-95