EGAF00004721606 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004721606
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22469871
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGGAA	31460	0.0	8.406675	94-95
GATCGGA	33590	0.0	8.290597	94-95
ACACGTC	12335	0.0	8.179892	94-95
AGATCGG	38075	0.0	8.168252	94-95
TCGGAAG	31395	0.0	7.82668	94-95
TAGATCG	11710	0.0	7.8055153	94-95
CGGAAGA	32255	0.0	7.2941446	94-95
CGTCTGA	9120	0.0	7.2368197	94-95
CACACGT	15360	0.0	7.00172	94-95
AAGATCG	13510	0.0	6.3965206	94-95
ACGTCTG	11245	0.0	6.33373	94-95
GCACACG	18165	0.0	6.2080607	94-95
CAGATCG	14705	0.0	6.054301	94-95
CACGTCT	13220	0.0	6.0519624	94-95
AGAGCAC	29805	0.0	5.4563127	94-95
GAGATCG	15645	0.0	5.2352967	94-95
GAGCACA	30890	0.0	5.0955777	94-95
AGCACAC	26410	0.0	5.0070806	94-95