EGAF00004721683 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00004721683
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21447748
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTCGT	11355	0.0	9.378616	94-95
CGTCGTG	10975	0.0	9.053565	94-95
ATCGGAA	31605	0.0	8.942808	94-95
AGCGTCG	12880	0.0	8.9325905	94-95
GATCGGA	34120	0.0	8.638942	94-95
TCGTGTA	8900	0.0	8.600304	94-95
GTCGTGT	10090	0.0	8.457679	94-95
AGATCGG	38680	0.0	8.3948345	94-95
AGAGCGT	18455	0.0	8.282183	94-95
GAGCGTC	16500	0.0	8.255029	94-95
TCGGAAG	31050	0.0	8.03851	94-95
AAGAGCG	21755	0.0	7.9874134	94-95
CGTGTAG	9265	0.0	7.5430984	94-95
TAGATCG	11695	0.0	7.418917	94-95
CGGAAGA	31460	0.0	7.1025944	94-95
AAGATCG	13575	0.0	6.93431	94-95
CAGATCG	14765	0.0	6.5042286	94-95
GAGATCG	15035	0.0	6.292562	94-95
GTAGGGA	11980	0.0	5.0002484	94-95